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Creating a Nextflow pipeline for gene count analysis

Motivation Given the interesting results found during the previously posted ChatGPT work, there was some sentiment that the python script that I had consolidated from that session might be reusable if it were generalized. I used this as an opportunity to explore creating a NextFlow pipeline, taking that python script... [Read More]
Tags: NextFlow

Using ChatGPT to explore thermal resilience based on gene counts

Intro This post has two motivations: Demonstrate using ChatGPT’s specialized Data Analyst model to explore a problem starting with the initial problem statement, showing dialog, generated code (often much modified by me). This section is quite long, but I’d be interested in your thoughts about the options it suggests in... [Read More]
Tags: rnaseq pca