Analysis Notebook

AWS Batch compute environment on Seqera

Posted on November 23, 2024 Written by: Steve Yost

11-23-2024 [Read More]

Tags: nextflow seqera aws rnaseq test

Posted on November 11, 2024 Written by: Emma Strand

RNASeq workflow for meta analysis with Cvig immunity [Read More]

Tags: nextflow Klone RNAseq

Posted on November 4, 2024 Written by: Shelly Wanamaker

This is a meta analysis of 4 RNAseq datasets each comparing different oysters infected with Perkinsus marinus. [Read More]

Tags: nextflow Klone RNAseq

Posted on November 4, 2024 Written by: Shelly Wanamaker

ran on 11-04-2024 ``` salloc -A srlab -p cpu-g2-mem2x -N 1 -c 1 –mem=100GB –time=2-12:00:00 [Read More]

Tags: nextflow Klone denovotranscript

Posted on October 9, 2024 Written by: Shelly Wanamaker

The 9/25/24 attempt failed [Read More]

Tags: nextflow Klone denovotranscript